 |
PDBsum entry 3oem
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3oem calculated with MOLE 2.0
|
PDB id
|
|
|
|
3oem
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
1 tunnel,
coloured by tunnel radius |
 |
10 tunnels,
coloured by
tunnel radius
|
10 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.11 |
1.47 |
15.8 |
-1.31 |
-0.20 |
25.9 |
81 |
 |
3 |
2 |
1 |
3 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.47 |
1.47 |
16.9 |
-1.40 |
-0.12 |
21.3 |
81 |
3 |
2 |
0 |
1 |
1 |
0 |
0 |
OEM 287 A
|
 |
3 |
 |
1.49 |
2.22 |
17.5 |
-1.41 |
-0.21 |
19.1 |
88 |
2 |
2 |
3 |
2 |
2 |
0 |
0 |
OEM 287 A
|
 |
4 |
 |
1.34 |
1.39 |
17.8 |
-1.51 |
-0.26 |
20.0 |
86 |
3 |
0 |
2 |
2 |
1 |
0 |
0 |
OEM 287 A
|
 |
5 |
 |
1.49 |
2.22 |
21.6 |
-1.71 |
-0.07 |
25.8 |
86 |
3 |
3 |
2 |
2 |
2 |
0 |
0 |
OEM 287 A
|
 |
6 |
 |
1.34 |
1.39 |
21.9 |
-1.78 |
-0.12 |
26.6 |
82 |
4 |
3 |
1 |
2 |
1 |
0 |
0 |
OEM 287 A
|
 |
7 |
 |
1.44 |
1.84 |
22.7 |
-1.03 |
-0.54 |
10.4 |
93 |
0 |
3 |
4 |
3 |
2 |
0 |
0 |
OEM 287 A
|
 |
8 |
 |
1.47 |
1.82 |
23.6 |
-0.69 |
-0.53 |
5.0 |
96 |
0 |
2 |
3 |
2 |
1 |
0 |
0 |
OEM 287 A
|
 |
9 |
 |
1.35 |
1.40 |
24.5 |
-0.96 |
-0.53 |
9.3 |
92 |
2 |
2 |
3 |
3 |
1 |
0 |
0 |
OEM 287 A
|
 |
10 |
 |
1.12 |
1.46 |
39.2 |
-0.93 |
-0.27 |
13.5 |
91 |
3 |
3 |
4 |
5 |
1 |
0 |
0 |
OEM 287 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |