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PDBsum entry 3oee

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Pore analysis for: 3oee calculated with MOLE 2.0 PDB id
3oee
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.75 27.8 0.40 -0.28 2.7 80 1 0 4 5 0 0 0  
2 4.65 5.97 53.6 -2.25 -0.51 23.2 81 6 6 6 3 1 0 0  
3 1.81 3.37 74.6 -1.96 -0.62 20.6 84 5 6 8 3 1 1 0  
4 1.93 3.82 79.2 -0.84 -0.44 15.8 86 4 5 9 5 0 1 0  
5 2.04 2.96 108.7 -2.03 -0.52 26.1 79 11 14 4 7 2 3 0  
6 1.38 1.48 112.3 -1.17 -0.37 16.9 80 10 9 5 10 2 4 0  
7 2.83 4.74 118.7 -1.98 -0.58 21.5 80 9 10 8 4 2 3 0  
8 1.39 1.30 127.6 -1.77 -0.57 20.9 84 13 15 13 9 1 1 0  
9 1.59 1.57 135.2 -1.67 -0.48 22.9 82 13 18 8 11 2 2 0  
10 2.33 3.42 157.1 -1.68 -0.57 21.5 81 16 16 9 8 3 2 0  
11 1.38 1.56 168.2 -0.71 -0.27 16.5 83 9 12 16 12 0 2 0  
12 1.91 3.35 183.8 -2.00 -0.61 21.6 85 14 17 21 11 2 1 0  
13 1.27 1.25 187.1 -1.32 -0.50 19.4 83 15 16 10 18 2 3 0  
14 1.87 4.09 189.9 -1.82 -0.49 22.1 83 13 18 17 14 4 0 0  
15 1.16 1.23 220.3 -1.57 -0.51 18.3 83 17 17 16 18 4 6 0  
16 2.89 4.18 226.1 -1.84 -0.56 20.7 85 18 24 23 14 5 0 0  
17 2.40 2.95 230.6 -2.05 -0.53 23.9 84 24 23 21 11 4 2 0  
18 2.10 3.63 262.8 -1.88 -0.53 19.9 83 21 23 26 15 7 1 0  
19 1.93 3.45 266.2 -2.04 -0.50 22.1 82 27 21 22 13 6 3 0  
20 1.44 3.07 296.0 -1.65 -0.53 20.8 84 18 21 21 18 1 1 0  
21 1.19 1.44 360.5 -1.44 -0.56 17.8 85 17 30 31 26 8 2 0  ANP 600 L MG 700 L

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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