PDBsum entry 3ocb Go to PDB code:  Tunnel analysis for: 3ocb calculated with MOLE 2.0 PDB id 3ocb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.26 26.4 -0.49 -0.24 14.1 75 4 1 0 1 3 0 0   2 1.12 1.23 38.3 -1.01 -0.43 15.5 81 3 5 1 3 3 0 0  XM1 2 B 3 1.10 1.24 43.1 -0.70 -0.34 17.0 83 5 6 0 5 2 0 0  XM1 2 B 4 1.21 2.87 22.9 0.46 0.44 10.3 71 2 1 1 4 2 1 0   5 1.21 1.55 16.0 0.52 0.33 15.6 75 2 1 1 2 1 1 0   6 1.21 1.21 16.0 1.23 0.11 7.2 81 0 2 0 4 1 0 0   7 1.52 1.65 15.1 -1.57 -0.57 16.7 86 1 2 1 1 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.