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PDBsum entry 3oaa

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Pore analysis for: 3oaa calculated with MOLE 2.0 PDB id
3oaa
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.84 2.78 36.1 -0.29 -0.16 11.1 89 1 3 4 5 2 0 0  
2 3.92 4.32 54.4 -1.63 -0.47 17.7 83 4 3 7 5 3 0 0  
3 1.22 1.39 72.9 -0.48 -0.22 13.4 88 5 5 10 10 2 0 0  
4 1.58 2.55 87.4 -1.60 -0.33 24.7 83 10 6 4 9 3 1 0  
5 1.56 1.66 120.9 -1.60 -0.45 21.6 87 13 8 10 13 2 2 0  
6 1.67 3.08 131.7 -1.12 -0.34 16.6 83 8 7 8 15 3 4 0  
7 1.32 2.70 135.2 -1.23 -0.38 18.4 85 11 11 20 18 2 0 0  
8 1.24 1.43 168.5 -1.19 -0.40 17.8 85 12 11 17 20 3 1 0  
9 1.28 2.85 168.6 -1.09 -0.35 17.4 84 11 11 16 15 3 0 0  
10 1.19 3.16 183.0 -1.65 -0.43 21.6 79 18 17 14 13 6 5 0  ANP 600 J
11 1.38 2.13 199.0 -1.67 -0.41 21.3 83 18 14 15 17 6 3 0  ANP 600 J
12 3.32 4.92 213.1 -1.45 -0.42 21.9 83 15 16 12 18 5 1 0  
13 1.26 3.21 225.9 -0.97 -0.17 18.5 82 20 15 15 28 6 5 0  
14 1.28 2.71 232.7 -1.06 -0.33 20.4 84 17 19 16 28 4 1 0  
15 1.22 2.71 237.7 -1.14 -0.25 19.8 83 16 15 14 27 6 4 0  
16 1.20 1.21 244.2 -1.41 -0.41 20.2 86 15 21 23 19 8 3 0  
17 1.79 3.32 244.0 -1.28 -0.38 17.8 85 16 17 25 27 6 5 0  
18 1.31 1.31 257.8 -1.02 -0.24 16.8 83 16 13 17 29 9 6 0  
19 1.46 1.71 249.5 -1.51 -0.45 18.4 83 17 18 20 19 8 6 0  ANP 600 J
20 1.44 1.55 256.4 -0.89 -0.25 18.6 82 17 17 12 31 6 3 0  
21 1.60 3.07 258.9 -1.67 -0.47 19.0 86 20 14 27 24 6 7 0  ANP 600 K MG 601 K
22 1.65 1.84 273.8 -1.20 -0.35 17.6 84 18 16 21 27 7 5 0  
23 1.28 1.60 296.7 -1.68 -0.49 19.4 86 25 19 35 28 6 4 0  ANP 600 K MG 601 K
24 1.19 3.68 313.1 -1.27 -0.30 22.6 84 21 23 18 33 6 2 0  
25 1.28 3.19 327.4 -0.94 -0.19 19.2 82 21 22 19 39 9 5 0  
26 1.39 2.22 343.5 -1.24 -0.32 18.0 83 23 18 19 31 12 9 0  ANP 600 J
27 1.27 3.12 355.1 -1.20 -0.34 20.3 84 19 26 22 36 7 3 0  
28 1.19 1.27 353.7 -1.11 -0.39 17.0 86 24 25 40 43 8 2 0  
29 1.37 1.78 397.9 -1.40 -0.37 19.1 84 28 23 31 36 12 6 0  ANP 600 J
30 1.28 1.28 439.1 -1.05 -0.32 17.8 85 25 29 37 51 11 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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