PDBsum entry 3o8x Go to PDB code:  Tunnel analysis for: 3o8x calculated with MOLE 2.0 PDB id 3o8x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.75 40.3 -0.26 0.12 7.2 77 2 2 3 8 4 1 1  GSL 501 A 2 1.23 2.73 47.3 0.94 0.67 5.0 67 2 1 2 10 7 1 1  GSL 501 A 3 1.46 1.56 16.8 -1.87 -0.05 18.1 78 2 1 3 0 2 1 0   4 1.47 1.54 17.0 -1.77 -0.10 14.9 71 1 1 3 0 3 1 0   5 1.24 1.73 16.7 -1.99 -0.21 16.5 79 2 1 3 1 2 0 0   6 1.24 1.73 23.5 -1.43 -0.31 11.2 84 1 1 5 1 2 0 0   7 1.23 1.23 18.1 0.41 -0.24 9.9 78 0 2 0 5 0 1 0   8 1.23 1.23 20.7 -0.01 -0.24 13.4 85 1 1 2 6 0 1 0   9 1.20 2.40 16.3 1.04 0.36 3.3 76 1 0 0 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.