spacer
spacer

PDBsum entry 3o5q

Go to PDB code: 
Top Page protein ligands clefts links
Cleft analysis for: 3o5q PDB id
3o5q
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2156.20 4.03 61.20 5 8.25 1 8.76 2 5 5 7 13 7 7 0 DMS 2[A] (4 atoms)
2 534.52 0.00 62.72 3 7.80 2 9.19 1 2 1 4 5 1 3 0  
3 402.89 0.00 61.30 4 4.71 4 7.39 3 2 2 2 4 0 1 0  
4 200.81 0.00 52.86 9 2.86 8 6.76 4 1 2 1 2 0 2 0  
5 237.52 0.00 57.67 7 5.52 3 5.57 7 3 0 1 3 1 2 0  
6 178.88 0.00 45.80 10 0.60 10 6.07 5 1 1 0 1 2 1 0  
7 142.59 0.00 65.64 1 2.56 9 5.83 6 0 0 5 2 0 1 0  
8 188.58 0.00 57.25 8 3.72 6 0.00 9 1 2 1 1 1 2 0  
9 151.88 0.00 64.42 2 3.02 7 5.48 8 2 2 1 0 1 0 0  
10 114.75 0.00 59.82 6 3.87 5 0.00 10 2 2 0 0 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer