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PDBsum entry 3o5k

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 3o5k calculated with MOLE 2.0 PDB id
3o5k
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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16 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.18 21.1 -0.25 -0.17 12.1 79 2 0 1 4 1 2 0  
2 2.18 24.4 -0.56 -0.26 12.5 73 2 1 1 4 2 2 0  
3 2.20 24.5 -0.70 -0.22 12.2 75 2 1 2 3 2 2 0  
4 2.18 27.2 -0.52 -0.24 12.5 83 3 1 4 3 2 0 0  
5 2.19 28.8 -0.71 -0.25 13.8 77 2 2 2 3 2 1 0  
6 2.21 31.8 -1.09 -0.46 17.8 74 2 2 1 5 1 1 0  
7 2.18 38.3 -1.11 -0.37 16.3 74 4 2 1 4 3 0 0  
8 2.19 40.6 -1.20 -0.30 18.3 75 5 3 1 4 2 0 0  
9 1.97 42.2 -1.25 -0.33 18.7 73 4 3 1 4 4 0 0  
10 2.20 47.2 -1.21 -0.49 16.4 77 3 2 3 3 2 1 0  
11 2.08 4.3 -0.75 -0.04 13.1 60 1 0 0 0 1 2 0  
12 1.89 5.4 -2.70 -0.55 39.2 79 2 2 0 0 0 0 0  
13 1.82 5.0 0.24 -0.18 8.7 77 1 0 0 1 0 0 0  
14 1.57 7.4 -0.19 0.10 20.1 65 2 0 0 2 0 0 0  
15 1.29 5.7 -0.98 -0.14 24.5 65 1 1 0 2 1 0 0  
16 1.71 7.6 0.39 -0.39 2.4 85 0 0 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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