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PDBsum entry 3o5j

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Tunnel analysis for: 3o5j calculated with MOLE 2.0 PDB id
3o5j
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.31 4.0 0.97 0.25 10.8 71 1 0 0 2 0 0 0  
2 1.73 4.8 -0.28 -0.04 17.2 83 2 0 0 2 0 0 0  
3 2.42 5.2 0.34 0.24 17.3 78 2 0 0 3 0 0 0  
4 2.19 7.1 1.06 0.02 2.0 74 0 0 1 2 1 0 0  
5 1.85 15.1 0.57 -0.10 4.5 73 1 0 1 1 1 0 0  
6 2.26 5.7 -0.26 1.00 9.1 59 0 1 0 1 5 0 0  
7 1.54 10.9 -0.26 0.60 13.8 70 1 1 1 2 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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