PDBsum entry 3o4z Go to PDB code:  Pore analysis for: 3o4z calculated with MOLE 2.0 PDB id 3o4z Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.50 31.3 -1.72 -0.35 22.9 71 5 2 2 5 2 0 0   2 1.70 1.76 35.6 0.85 0.34 13.0 75 3 2 1 6 2 0 0   3 3.56 5.84 36.1 -1.05 -0.06 17.9 88 6 3 8 5 1 1 0   4 3.14 3.25 36.6 -1.38 -0.25 22.8 83 6 2 5 4 1 1 0   5 1.70 1.76 37.1 -1.20 -0.17 24.7 77 6 6 2 7 1 0 0   6 3.32 3.59 37.8 -1.27 -0.07 22.6 83 8 5 4 3 1 1 0   7 1.70 1.76 42.2 0.46 0.21 13.7 75 3 3 3 6 3 0 0   8 3.55 3.68 42.8 -1.10 -0.07 21.6 84 6 4 7 5 1 2 0   9 1.50 1.68 46.8 -0.95 -0.29 20.0 84 5 2 2 3 0 0 1   10 1.70 1.76 49.9 -1.14 -0.20 22.9 77 6 7 3 7 2 0 0   11 2.96 3.24 49.8 -1.35 -0.26 15.7 91 5 4 9 5 1 1 0   12 1.69 1.69 52.9 -0.78 -0.10 21.3 78 6 5 2 9 1 0 0   13 1.23 1.23 53.3 -1.35 -0.26 21.8 74 6 3 1 4 2 0 0   14 1.68 1.68 56.2 -1.05 -0.20 23.1 76 6 6 3 8 2 0 0   15 1.74 1.78 63.2 -0.14 0.16 17.1 80 7 4 8 9 3 2 0   16 1.50 1.50 72.3 -1.24 -0.27 23.1 76 8 7 3 8 4 0 0   17 2.23 2.25 86.0 -1.48 -0.38 20.1 86 9 4 7 7 0 0 1   18 1.97 2.25 86.2 -1.41 -0.25 18.6 86 9 2 9 6 1 1 1   19 3.05 5.02 112.2 -1.98 -0.44 24.8 90 9 10 15 7 2 1 0   20 2.96 4.82 129.9 -2.01 -0.39 23.8 91 11 9 19 9 2 2 0   21 1.62 1.81 27.2 -0.25 -0.05 18.9 67 3 3 0 3 1 0 0   22 1.58 1.65 28.0 -0.41 -0.06 20.9 69 4 3 0 3 1 0 0   23 1.27 1.27 29.4 -0.96 -0.39 14.1 90 2 2 3 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.