PDBsum entry 3o4l Go to PDB code:  Tunnel analysis for: 3o4l calculated with MOLE 2.0 PDB id 3o4l Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.26 18.0 -1.13 -0.28 11.2 72 2 2 2 2 3 0 0  GOL 247 E 2 1.32 1.62 23.1 -1.57 -0.36 15.1 78 3 4 2 0 3 0 1  GOL 202 D 3 1.32 1.59 27.7 -2.04 -0.60 16.6 84 3 4 4 1 2 0 1  GOL 202 D 4 1.18 2.95 15.1 1.13 0.48 8.7 87 2 0 2 5 1 1 0  GOL 248 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.