PDBsum entry 3o37

Pore analysis for: 3o37 calculated with

MOLE 2.0

PDB id

3o37

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

10 pores, coloured by radius

10 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.46

1.49

30.7

-2.16

-0.53

24.6

79

3

2

2

1

1

3

0

2

1.19

2.17

45.6

-0.82

-0.17

14.5

83

3

3

5

4

1

4

0

3

1.22

2.13

52.4

-1.48

-0.32

16.7

71

2

2

3

2

1

4

1

4

2.77

3.53

54.9

-0.78

-0.03

11.4

80

1

4

3

5

2

5

0

5

1.22

2.22

61.9

-1.81

-0.59

19.6

75

5

4

5

1

1

2

3

6

1.30

1.30

62.5

-1.76

-0.39

19.4

75

8

3

3

2

1

6

0

7

1.31

1.29

71.8

-1.39

-0.35

15.4

80

6

2

4

4

1

6

0

8

1.45

2.10

78.0

-1.37

-0.23

19.0

77

6

6

5

6

4

4

0

9

2.53

2.72

92.3

-1.72

-0.44

20.1

82

6

6

6

2

1

4

2

10

1.46

1.51

98.2

-1.16

-0.44

16.4

79

3

6

4

4

3

5

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.