 |
PDBsum entry 3o15
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3o15 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3o15
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
1 tunnel,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.96 |
2.98 |
15.2 |
-1.82 |
-0.23 |
26.5 |
89 |
|
4 |
4 |
4 |
3 |
1 |
0 |
0 |
|
3NM 236 A IFP 237 A POP 238 A
|
 |
|
2 |
 |
1.48 |
2.48 |
15.9 |
-1.97 |
-0.21 |
28.1 |
87 |
4 |
4 |
4 |
3 |
2 |
0 |
0 |
3NM 236 A IFP 237 A POP 238 A
|
|
3 |
 |
1.24 |
1.48 |
16.3 |
0.67 |
0.05 |
4.3 |
93 |
1 |
0 |
0 |
4 |
0 |
1 |
0 |
3NM 236 A
|
|
4 |
 |
1.43 |
1.44 |
20.0 |
-1.13 |
-0.06 |
26.2 |
92 |
3 |
4 |
2 |
3 |
0 |
0 |
0 |
3NM 236 A IFP 237 A POP 238 A
|
|
5 |
 |
1.65 |
1.65 |
26.8 |
-0.01 |
-0.03 |
11.6 |
96 |
3 |
1 |
4 |
4 |
1 |
0 |
0 |
3NM 236 A IFP 237 A POP 238 A
|
 |
6 |
 |
1.50 |
2.47 |
27.5 |
-0.14 |
0.00 |
12.2 |
93 |
3 |
1 |
4 |
4 |
2 |
0 |
0 |
3NM 236 A IFP 237 A POP 238 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program