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PDBsum entry 3nxq

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3nxq calculated with MOLE 2.0 PDB id
3nxq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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19 tunnels, coloured by tunnel radius 23 tunnels, coloured by tunnel radius 23 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.25 42.8 -0.84 -0.06 8.1 83 3 1 11 3 7 0 0  700 RX4 B,710 PEG B
2 1.30 45.1 -0.91 -0.06 8.3 79 2 1 8 4 9 0 0  700 RX4 B,710 PEG B
3 1.32 57.4 -1.84 -0.39 18.9 86 5 6 9 4 5 0 0  650 ZN B,700 RX4 B
4 1.79 58.0 -2.13 -0.47 20.3 89 6 6 11 3 3 0 0  650 ZN B,700 RX4 B
5 1.30 58.0 -2.01 -0.45 21.1 88 5 8 10 2 5 0 0  650 ZN B,700 RX4 B
6 1.77 58.7 -2.28 -0.53 22.2 91 6 8 12 1 3 0 0  650 ZN B,700 RX4 B
7 1.88 64.5 -1.80 -0.36 21.0 85 8 7 9 1 3 0 1  650 ZN B,700 RX4 B
8 1.31 63.9 -1.57 -0.28 19.8 82 7 6 7 2 5 0 1  700 RX4 B
9 1.79 21.4 -2.23 -0.10 22.3 72 3 0 3 0 3 1 0  
10 1.77 23.7 -1.97 -0.16 20.4 69 3 0 2 0 5 1 0  
11 1.33 25.2 -1.80 -0.21 16.8 71 3 0 2 1 3 3 0  
12 1.72 8.4 -0.06 -0.11 1.7 73 0 0 1 2 1 1 0  
13 1.56 11.3 -0.26 0.29 6.0 69 0 1 1 2 2 2 0  
14 1.69 17.7 0.35 -0.06 2.2 60 0 0 0 4 3 1 0  
15 1.59 14.2 -0.21 -0.20 6.8 85 1 1 4 2 0 1 0  634 NAG A
16 1.57 7.5 -2.38 -0.18 27.8 83 2 1 2 0 1 0 0  708 P6G A
17 1.52 8.3 -2.25 -0.19 23.2 83 2 1 3 0 1 0 0  708 P6G A
18 2.08 4.7 -1.42 -0.51 18.3 79 1 2 2 1 0 0 0  
19 2.15 4.8 -2.46 -0.76 26.4 79 1 2 2 1 0 0 0  
20 1.75 3.4 -0.64 -0.45 9.1 96 1 0 1 2 0 0 0  
21 2.01 6.9 -1.56 -0.21 32.8 87 2 1 0 3 0 0 0  
22 3.08 3.5 -0.49 -0.25 12.2 75 1 0 1 1 0 1 0  
23 1.76 5.5 -1.05 -0.40 17.9 81 2 0 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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