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PDBsum entry 3ntg

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3ntg calculated with MOLE 2.0 PDB id
3ntg
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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16 tunnels, coloured by tunnel radius 18 tunnels, coloured by tunnel radius 18 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.50 10.7 0.38 0.18 2.0 80 0 0 3 2 2 1 0  
2 1.25 11.8 0.68 0.03 3.7 79 1 0 1 2 1 1 0  
3 2.64 13.0 -2.49 -0.68 21.8 91 3 1 3 1 0 0 0  
4 2.33 21.1 -1.83 -0.62 23.6 86 3 2 3 1 1 0 0  
5 3.05 3.4 -1.17 -0.34 25.0 90 2 1 0 1 0 0 0  
6 1.44 15.8 -0.19 -0.02 8.1 77 1 1 1 3 1 1 0  
7 1.84 4.0 0.05 -0.08 2.1 72 0 0 1 3 1 1 0  
8 1.47 7.1 0.71 0.01 2.0 77 0 0 1 4 0 2 0  
9 1.40 14.3 1.11 0.15 11.9 89 0 2 0 5 0 0 0  
10 1.27 6.7 2.40 0.63 1.4 78 1 0 0 2 0 0 0  
11 1.33 34.1 0.73 0.01 8.8 88 0 1 1 3 1 0 0  
12 1.48 8.9 0.55 -0.12 2.1 79 0 0 1 3 0 2 0  
13 1.43 11.0 0.31 0.20 1.9 80 0 0 3 2 2 1 0  
14 1.35 8.0 -1.47 -0.61 17.9 92 1 2 2 4 0 0 0  
15 1.56 10.7 0.15 -0.23 2.3 83 0 0 2 3 0 2 0  
16 1.43 8.9 0.75 0.04 2.1 90 0 0 3 2 0 1 0  
17 1.32 8.4 -2.53 -0.38 31.4 84 2 0 1 1 0 1 0  
18 1.36 11.1 0.65 -0.12 2.2 93 0 0 2 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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