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PDBsum entry 3nnu

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protein ligands links
Transferase PDB id
3nnu
Jmol PyMol
Contents
Protein chain
348 a.a. *
Ligands
EDB
Waters ×177
* Residue conservation analysis
PDB id:
3nnu
Name: Transferase
Title: Crystal structure of p38 alpha in complex with dp1376
Structure: Mitogen-activated protein kinase 14. Chain: a. Synonym: map kinase 14, mapk 14, mitogen-activated protein alpha, map kinase p38 alpha, cytokine suppressive anti-infl drug-binding protein, csaid-binding protein, csbp, max-inte protein 2, map kinase mxi2, sapk2a. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: mapk14, csbp, csbp1, csbp2, cspb1, mxi2. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf9.
Resolution:
2.40Å     R-factor:   0.180     R-free:   0.227
Authors: J.Abendroth
Key ref: Y.M.Ahn et al. (2010). Switch control pocket inhibitors of p38-MAP kinase. Durable type II inhibitors that do not require binding into the canonical ATP hinge region. Bioorg Med Chem Lett, 20, 5793-5798. PubMed id: 20800479 DOI: 10.1016/j.bmcl.2010.07.134
Date:
24-Jun-10     Release date:   15-Sep-10    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q16539  (MK14_HUMAN) -  Mitogen-activated protein kinase 14
Seq:
Struc:
360 a.a.
348 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.24  - Mitogen-activated protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + a protein = ADP + a phosphoprotein
ATP
+ protein
= ADP
+ phosphoprotein
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     extracellular region   12 terms 
  Biological process     intracellular signal transduction   65 terms 
  Biochemical function     nucleotide binding     13 terms  

 

 
    reference    
 
 
DOI no: 10.1016/j.bmcl.2010.07.134 Bioorg Med Chem Lett 20:5793-5798 (2010)
PubMed id: 20800479  
 
 
Switch control pocket inhibitors of p38-MAP kinase. Durable type II inhibitors that do not require binding into the canonical ATP hinge region.
Y.M.Ahn, M.Clare, C.L.Ensinger, M.M.Hood, J.W.Lord, W.P.Lu, D.F.Miller, W.C.Patt, B.D.Smith, L.Vogeti, M.D.Kaufman, P.A.Petillo, S.C.Wise, J.Abendroth, L.Chun, R.Clark, M.Feese, H.Kim, L.Stewart, D.L.Flynn.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21364689 M.A.Pierotti, E.Tamborini, T.Negri, S.Pricl, and S.Pilotti (2011).
Targeted therapy in GIST: in silico modeling for prediction of resistance.
  Nat Rev Clin Oncol, 8, 161-170.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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