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PDBsum entry 3nlc

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Tunnel analysis for: 3nlc calculated with MOLE 2.0 PDB id
3nlc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 3.33 16.6 1.08 0.27 5.1 71 1 0 0 6 2 1 0  MSE 281 A
2 1.20 1.39 16.5 1.90 0.63 6.8 79 2 0 0 6 1 0 0  
3 1.19 1.37 16.6 2.01 0.64 5.6 81 2 0 0 6 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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