PDBsum entry 3njp Go to PDB code:  Pore analysis for: 3njp calculated with MOLE 2.0 PDB id 3njp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.34 29.8 -2.93 -0.69 35.6 85 5 3 2 0 0 0 0   2 1.86 2.02 46.6 -1.94 -0.30 27.3 83 6 4 2 5 0 2 0   3 1.49 2.80 56.7 -0.48 -0.21 12.3 87 7 3 5 9 2 0 0   4 1.48 2.75 71.1 -1.24 -0.33 19.0 86 7 5 5 6 2 1 0   5 1.28 2.59 73.8 -0.80 -0.12 13.5 82 6 6 6 6 6 1 0   6 1.39 1.59 74.9 -2.02 -0.51 25.6 86 7 4 4 3 1 1 0   7 1.37 1.60 98.4 -1.45 -0.44 20.4 82 8 6 6 6 2 1 1   8 1.30 2.64 113.6 -1.41 -0.40 19.5 79 8 7 4 5 3 1 0   9 1.57 1.77 115.8 -2.01 -0.42 24.4 82 11 7 5 5 3 2 0   10 1.28 1.31 137.5 -0.55 -0.18 14.3 83 11 8 7 11 5 0 1   11 2.30 2.29 136.9 -2.18 -0.57 22.2 86 8 7 7 3 2 2 0  NAG 1151 A NAG 1337 A 12 1.21 1.32 154.4 -1.26 -0.32 16.2 86 12 7 10 8 4 1 0  NAG 1337 A 13 1.29 1.31 181.6 -1.44 -0.41 21.4 84 12 8 6 6 1 1 1  NAG 1337 A 14 1.91 2.01 190.5 -1.56 -0.39 21.7 85 13 9 8 11 3 1 0  NAG 1337 A 15 1.46 2.89 190.5 -1.57 -0.42 21.1 86 12 10 10 11 3 1 0  NAG 1337 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.