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PDBsum entry 3nj9

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Cleft analysis for: 3nj9 PDB id
3nj9
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1959.61 2.05 60.10 8 12.36 1 13.87 1 6 4 4 2 4 7 0  
2 958.08 0.00 69.58 3 9.87 2 7.68 5 5 3 5 10 4 3 0 TE2 300[A] (18 atoms)
3 944.58 0.00 53.85 10 5.74 10 6.78 9 3 2 3 5 1 4 0  
4 711.70 0.00 70.00 2 9.37 4 6.93 8 4 3 5 2 2 4 0  
5 494.02 0.00 56.84 9 6.37 9 8.24 3 4 0 2 2 3 0 0  
6 431.16 0.00 61.30 7 7.85 7 7.39 7 2 2 2 3 2 2 0  
7 525.66 0.00 65.25 5 8.18 6 8.76 2 3 3 4 4 1 2 0  
8 433.27 0.00 73.69 1 9.24 5 7.88 4 5 1 2 2 0 4 0  
9 351.00 0.00 63.94 6 9.78 3 7.50 6 1 2 5 1 2 0 0  
10 306.70 0.00 68.46 4 6.61 8 3.79 10 4 1 1 0 3 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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