PDBsum entry 3nda Go to PDB code:  Pore analysis for: 3nda calculated with MOLE 2.0 PDB id 3nda Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.96 2.09 25.6 -2.48 -0.54 27.5 78 8 2 2 1 1 1 0   2 1.40 1.76 55.0 -1.64 -0.53 18.7 84 3 3 3 4 2 1 0   3 1.95 2.03 55.3 -1.64 -0.54 18.4 89 3 3 4 4 1 1 0   4 1.40 1.76 65.2 -1.69 -0.54 17.8 81 6 3 3 4 2 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.