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PDBsum entry 3ncb

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3ncb calculated with MOLE 2.0 PDB id
3ncb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.24 19.4 -0.43 -0.08 17.4 89 1 2 0 3 1 0 0  
2 1.17 1.30 56.7 -0.88 0.00 20.8 85 6 5 2 6 4 0 1  
3 1.09 2.40 23.7 1.13 0.81 5.3 67 1 3 0 8 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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