PDBsum entry 3nbf Go to PDB code:  Pore analysis for: 3nbf calculated with MOLE 2.0 PDB id 3nbf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.94 4.34 25.3 -1.32 -0.67 18.4 90 1 6 2 4 0 1 0  8OD 600 D 2 2.94 3.97 26.0 -1.15 -0.68 16.4 86 0 3 4 4 0 1 0  8OP 500 D 3 2.94 3.88 28.3 -1.05 -0.64 14.1 88 1 5 4 4 0 1 0   4 2.23 2.50 116.9 -1.66 -0.47 18.9 80 7 9 5 3 2 7 0  8OD 500 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.