PDBsum entry 3nab Go to PDB code:  Tunnel analysis for: 3nab calculated with MOLE 2.0 PDB id 3nab Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.70 1.85 25.1 -0.18 0.07 6.5 73 0 1 1 2 2 2 0   2 1.64 1.73 18.5 -0.66 -0.74 2.4 108 0 0 7 1 0 0 0   3 1.64 1.72 19.0 -0.53 -0.70 2.3 103 0 0 7 1 1 0 0   4 1.60 3.07 20.2 -0.94 -0.79 2.9 104 1 0 8 1 0 0 0   5 1.63 3.01 20.6 -0.89 -0.76 2.7 100 1 0 8 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.