PDBsum entry 3n9p Go to PDB code:  Tunnel analysis for: 3n9p calculated with MOLE 2.0 PDB id 3n9p Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 2.97 42.2 -0.69 -0.03 18.6 78 3 2 2 6 5 0 0  FE2 1 A OGA 4 A MLY 27 C 2 1.23 2.96 48.6 -1.21 -0.28 23.2 84 4 4 2 6 3 0 0  FE2 1 A OGA 4 A MLY 27 C 3 1.41 1.57 18.5 -1.09 -0.32 16.2 81 2 2 3 2 1 1 0   4 1.32 1.32 21.3 -1.00 -0.32 16.5 82 2 2 4 4 1 1 0   5 1.42 1.57 25.8 -1.37 -0.31 23.6 82 2 3 3 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.