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Ligand clusters for UniProt code P05979

Ligand clusters for P05979: Prostaglandin G/H synthase 1 OS=Ovis aries GN=PTGS1 PE=1 SV=2

Top 6 (of 9) ligand clusters
Cluster 1.
9 ligand types
25 ligands
Cluster 2.
20 ligand types
55 ligands
Cluster 3.
7 ligand types
17 ligands
Cluster 4.
5 ligand types
23 ligands
Cluster 5.
5 ligand types
27 ligands
Cluster 6.
4 ligand types
30 ligands
Representative protein: 1prhA  
 

Structures

PDB   Schematic diagram
1prhA    
1ht8A    
1eqhA    
2oyuP    
2oyeP    
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 Cluster 1 contains 9 ligand types

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Ligand Description


 
1. Ligand: NAG × 5
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1eqg(A), 1eqh(A), 1ht5(A), 1ht8(A),


 
2. Ligand: BOG × 1
B-Octylglucoside
PDB code: 1u67(A).


 
3. Ligand: NAG-NAG × 8
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 1cqe(A), 1djj(A), 1ebv(A), 1pge(A), 1pgf(A), 1pgg(A), 3n8z(A), 4o1z(A).


 
4. Ligand: NAG-NDG-BMA-MAN-MAN × 3
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose.
PDB codes: 1q4g(A), 3n8v(A), 3n8w(A).


 
5. Ligand: NAG-NAG-BMA-BMA × 2
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose.
PDB codes: 1u67(A), 2oye(P).


 
6. Ligand: NAG-NAG-BMA-BMA-BMA × 2
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose.
PDB codes: 1fe2(A), 3n8x(A).


 
7. Ligand: NAG-NAG-BMA-BMA-MAN × 2
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose.
PDB codes: 1diy(A), 1igz(A).


 
8. Ligand: NAG-NAG-BMA × 1
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose.
PDB code: 2oyu(P).


 
9. Ligand: NAG-NAG-MAN-BMA-MAN × 1
NAG=N-Acetyl-D-Glucosamine, MAN=Alpha-D-Mannose, BMA=Beta-D-Mannose.
PDB code: 3kk6(A).

 

 Cluster 2 contains 20 ligand types

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Ligand Description


 
1. Ligand: ACD × 2
Arachidonic acid
PDB codes: 1diy(A), 1u67(A).


 
2. Ligand: FLP × 4
flurbiprofen
Flurbiprofen
PDB codes: 1cqe(A), 1eqh(A), 3n8w(A), 3n8z(A).


 
3. Ligand: CEL × 1
celecoxib
4-[5-(4-Methylphenyl)-3-(Trifluoromethyl)-1h-Pyrazol-1- Yl]benzenesulfonamide
PDB code: 3kk6(A).


 
4. Ligand: IBP × 1
ibuprofen
Ibuprofen
PDB code: 1eqg(A).


 
5. Ligand: LAX × 1
gamma-homolinolenic acid
Eicosa-8,11,14-Trienoic acid
PDB code: 1fe2(A).


 
6. Ligand: MXM × 1
meloxicam
4-Hydroxy-2-Methyl-N-(5-Methyl-1,3-Thiazol-2-Yl)-2h-1, 2-Benzothiazine-3-Carboxamide 1,1-Dioxide
PDB code: 4o1z(A).


 
7. Ligand: EIC × 1
Linoleic acid
PDB code: 1igz(A).


 
8. Ligand: BOG × 20
B-Octylglucoside
PDB codes: 1cqe(A), 1diy(A), 1eqg(A), 1eqh(A), 1fe2(A), 1ht5(A), 1ht8(A), 1igz(A), 1pge(A), 1q4g(A), 1u67(A),


 
9. Ligand: 34C × 1
(3-Chloro-4-Propoxy-Phenyl)-Acetic acid
PDB code: 1ht8(A).


 
10. Ligand: BFL × 1
2-(1,1'-Biphenyl-4-Yl)propanoic acid
PDB code: 1q4g(A).


 
11. Ligand: FL2 × 1
Flurbiprofen methyl ester
PDB code: 1ht5(A).


 
12. Ligand: ISF × 1
P-(2'-Iodo-5'-Thenoyl)hydrotropic acid
PDB code: 1pge(A).


 
13. Ligand: IMM × 2
1-(4-Iodobenzoyl)-5-Methoxy-2-Methyl indole-3-Acetic acid
PDB codes: 1pgf(A), 1pgg(A).


 
14. Ligand: SCL × 1
Acetic acid salicyloyl-Amino-Ester
PDB code: 1ebv(A).


 
15. Ligand: BOG × 12
B-Octylglucoside
PDB codes: 1djj(A), 2oye(P), 2oyu(P), 3kk6(A), 3n8v(A), 3n8w(A), 3n8z(A),


 
16. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 1igz(A).


 
17. Ligand: IM8 × 1
2-[1-(4-Chlorobenzoyl)-5-Methoxy-2-Methyl-1h-Indol-3- Yl]-N-[(1r)-1-(Hydroxymethyl)propyl]acetamide
PDB code: 2oye(P).


 
18. Ligand: IMS × 1
2-[1-(4-Chlorobenzoyl)-5-Methoxy-2-Methyl-1h-Indol-3- Yl]-N-[(1s)-1-(Hydroxymethyl)propyl]acetamide
PDB code: 2oyu(P).


 
19. Ligand: NIM × 1
4-Nitro-2-Phenoxymethanesulfonanilide
PDB code: 3n8x(A).


 
20. Ligand: NSA × 1
2,2-Dichloro-N-Phenyl-Acetamide
PDB code: 1djj(A).

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 Cluster 3 contains 7 ligand types

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Ligand Description


 
1. Ligand: NAG × 6
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1eqg(A), 1eqh(A), 1ht5(A), 1ht8(A).


 
2. Ligand: NAG-NAG × 6
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 1cqe(A), 1pge(A), 1pgf(A), 1pgg(A), 3n8x(A), 4o1z(A).


 
3. Ligand: NAG-NAG-BMA-BMA-MAN × 1
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose.
PDB code: 3n8z(A).


 
4. Ligand: NAG-NAG-MAN-BMA × 1
NAG=N-Acetyl-D-Glucosamine, MAN=Alpha-D-Mannose, BMA=Beta-D-Mannose.
PDB code: 3kk6(A).


 
5. Ligand: NAG-NDG-BMA × 1
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose, BMA=Beta-D-Mannose.
PDB code: 3n8w(A).


 
6. Ligand: NAG-NDG-BMA-BMA × 1
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose, BMA=Beta-D-Mannose.
PDB code: 3n8v(A).


 
7. Ligand: NAG-NDG-BMA-BMA-BMA × 1
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose, BMA=Beta-D-Mannose.
PDB code: 1q4g(A).

 

 Cluster 4 contains 5 ligand types

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Ligand Description


 
1. Ligand: NAG × 10
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1djj(A), 1ebv(A), 1eqg(A), 1eqh(A), 1ht5(A), 1ht8(A), 1pge(A), 1pgf(A), 1pgg(A), 3n8x(A).


 
2. Ligand: NAG-NAG × 9
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 1cqe(A), 1diy(A), 1fe2(A), 1igz(A), 2oye(P), 2oyu(P), 3n8v(A), 3n8z(A), 4o1z(A).


 
3. Ligand: NAG-NDG × 2
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose.
PDB codes: 1u67(A), 3kk6(A).


 
4. Ligand: NAG-NAG-BMA × 1
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose.
PDB code: 3n8w(A).


 
5. Ligand: NAG-NAG-BMA-BMA × 1
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose.
PDB code: 1q4g(A).

 

 Cluster 5 contains 5 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 1q4g(A).


 
2. Ligand: HEM × 11
Protoporphyrin IX containing fe
PDB codes: 1cqe(A), 1ebv(A), 1eqg(A), 1eqh(A), 1ht5(A), 1ht8(A), 1pge(A), 1pgf(A), 1pgg(A), 1prh(A), 1q4g(A).


 
3. Ligand: COH × 4
Protoporphyrin IX containing co
PDB codes: 1diy(A), 1fe2(A), 1igz(A), 1u67(A).


 
4. Ligand: HEM × 9
Protoporphyrin IX containing fe
PDB codes: 1djj(A), 2oye(P), 2oyu(P), 3kk6(A), 3n8v(A), 3n8w(A), 3n8x(A), 3n8z(A), 4o1z(A).


 
5. Ligand: FLC × 2
Citrate anion
PDB codes: 2oye(P), 3kk6(A).

 

 Cluster 6 contains 4 ligand types

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Ligand Description


 
1. Ligand: NAG × 13
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1djj(A), 1ebv(A), 1eqg(A), 1eqh(A), 1ht5(A), 1ht8(A), 1pge(A), 1pgf(A), 1pgg(A), 4o1z(A).


 
2. Ligand: BOG × 5
B-Octylglucoside
PDB codes: 1cqe(A), 1eqg(A), 1eqh(A), 1ht8(A), 1q4g(A).


 
3. Ligand: NAG-NDG × 8
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose.
PDB codes: 1diy(A), 1igz(A), 1q4g(A), 1u67(A), 2oye(P), 3n8v(A), 3n8w(A), 3n8z(A).


 
4. Ligand: NAG-NAG × 4
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 1cqe(A), 1fe2(A), 2oyu(P), 3n8x(A).

 

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