PDBsum entry 3n8x Go to PDB code:  Tunnel analysis for: 3n8x calculated with MOLE 2.0 PDB id 3n8x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.22 40.1 2.13 0.73 4.5 69 1 0 0 14 2 2 0  NIM 701 A 2 1.27 1.26 45.7 1.35 0.27 3.2 79 2 0 4 11 3 0 0  NIM 701 A 3 1.19 1.39 61.7 -0.14 -0.18 3.6 78 2 0 8 5 3 1 0   4 1.18 1.18 75.1 1.03 0.25 3.4 74 2 0 7 16 10 1 0  NIM 701 A NAG 1 F 5 1.96 2.03 20.3 -0.94 -0.11 21.7 91 5 1 1 3 1 0 0  HEM 601 A 6 1.86 2.31 24.7 0.29 0.44 13.6 78 4 0 1 8 2 0 0  HEM 601 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.