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PDBsum entry 3n8x

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3n8x calculated with MOLE 2.0 PDB id
3n8x
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.29 121.8 0.44 0.19 9.8 73 6 4 4 20 6 3 0  701 NIM A
2 1.88 19.4 -1.32 -0.12 19.5 89 3 1 2 3 2 0 0  601 HEM B
3 2.00 20.3 -0.94 -0.11 21.7 91 5 1 1 3 1 0 0  601 HEM A
4 1.87 24.7 0.29 0.44 13.6 78 4 0 1 8 2 1 0  601 HEM A
5 1.95 6.7 -1.68 -0.50 27.9 91 2 1 1 1 0 0 0  
6 1.39 8.8 -0.32 -0.31 9.8 85 1 1 1 1 0 1 0  
7 1.74 6.2 -0.24 0.25 10.0 77 1 1 1 2 1 0 0  
8 2.09 7.9 -2.57 -0.40 31.9 77 2 2 1 0 1 1 0  
9 1.51 7.8 -1.56 -0.26 25.9 73 3 0 0 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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