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PDBsum entry 3n8w

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Ligand/metal interactions PDB id
3n8w
Ligand highlighted
NAG-NDG-BMA-MAN-
MAN
Ligands
HEM ×2
HEM 801(A)
FLP
FLP 701(A)
NAG-NDG ×2
NAG 661(A) to NDG 662(A)
NAG-NAG-BMA
NAG 681(A) to BMA 683(A)
NAG-NDG-BMA-MAN-
MAN
NAG 671(A) to MAN 675(A)
BOG ×3
BOG 751(A)
BOG 1750(B)
NDG-NAG-MAN
NDG 1681(B) to MAN 1683(B)
NAG-NDG-BMA
NAG 1671(B) to BMA 1673(B)
  
Ligand NAG-NDG-BMA-MAN-MAN

NAG - N-Acetyl-D-Glucosamine Formula: C8H15NO6
NDG - 2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose Formula: C8H15NO6
BMA - Beta-D-Mannose Formula: C6H12O6
MAN - Alpha-D-Mannose Formula: C6H12O6
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
NAG 671(A) 15 15 1 1 Complete Chiral checks - OK
NDG 672(A) 15 15 1 0 Complete Chiral checks - OK
BMA 673(A) 12 12 1 0 Complete Chiral checks - OK
MAN 674(A) 12 12 1 0 Complete Chiral checks - OK
MAN 675(A) 12 12 1 0 Complete Chiral checks - OK
Additional Information

Jmol
 

LIGPLOT of interactions involving ligand


Jmol


 

NAG 671(A) to MAN 675(A)

  
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