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PDBsum entry 3n4p

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3n4p calculated with MOLE 2.0 PDB id
3n4p
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 3.47 15.1 3.00 1.13 6.2 85 1 1 0 6 1 0 0  
2 1.18 1.50 20.1 1.60 0.50 5.2 86 0 2 2 5 1 0 0  
3 1.32 1.32 16.1 -1.20 -0.73 14.3 84 2 1 2 0 1 0 0  
4 1.28 1.28 21.6 -1.77 -0.58 17.4 71 3 2 2 0 3 0 0  
5 1.21 1.41 16.2 -1.27 -0.65 10.1 84 1 1 5 2 1 0 0  
6 1.22 1.41 18.6 -0.53 -0.03 10.8 73 1 1 2 2 3 1 0  
7 1.22 1.44 17.6 0.10 -0.25 10.8 77 1 1 1 3 1 0 0  
8 1.16 1.27 17.7 0.63 0.43 1.4 68 0 0 0 3 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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