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PDBsum entry 3n3j

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Tunnel analysis for: 3n3j calculated with MOLE 2.0 PDB id
3n3j
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.62 8.1 -1.62 -0.24 17.7 72 2 0 0 1 1 1 0  
2 1.31 18.5 -1.86 -0.03 16.1 70 2 1 1 0 1 2 0  
3 1.89 15.3 -1.56 -0.18 12.0 86 3 0 4 1 2 1 0  263 WWV A,303 GOL A
4 1.99 17.3 -0.29 0.17 8.0 81 2 0 3 2 2 1 0  263 WWV A,303 GOL A
5 1.64 5.4 0.42 0.79 6.2 59 1 0 0 1 3 0 0  
6 1.61 7.4 -1.89 -0.29 35.7 71 2 1 0 1 0 0 0  
7 1.59 9.2 -1.75 -0.20 36.6 67 2 1 0 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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