PDBsum entry 3mzw Go to PDB code:  Tunnel analysis for: 3mzw calculated with MOLE 2.0 PDB id 3mzw Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.91 1.91 15.3 -1.08 -0.30 4.8 75 1 0 1 2 2 1 0   2 1.27 2.05 17.7 -0.53 0.12 5.6 81 2 0 2 5 2 1 0   3 1.52 1.52 23.8 0.59 -0.12 4.6 82 2 1 2 6 0 0 0   4 1.52 1.52 28.4 -0.44 -0.37 11.7 80 2 3 2 5 0 0 0   5 1.58 1.82 33.1 -0.85 -0.39 11.4 79 2 3 3 4 1 0 1   6 1.25 1.30 16.1 -0.73 -0.24 18.4 74 3 1 1 2 0 0 2   7 1.24 1.30 21.1 -1.31 -0.21 25.1 72 4 1 0 2 0 0 2   8 1.25 1.30 16.1 -0.73 -0.24 18.4 74 3 1 1 2 0 0 2   9 1.24 1.30 21.1 -1.31 -0.21 25.1 72 4 1 0 2 0 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.