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PDBsum entry 3myq

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Tunnel analysis for: 3myq calculated with MOLE 2.0 PDB id
3myq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.84 13.8 -1.73 -0.33 12.6 88 3 0 4 1 2 0 0  265 DMS A,266 E27 A
2 1.51 6.4 -1.60 -0.68 13.6 74 2 0 1 0 0 1 0  
3 1.25 9.1 -1.48 -0.05 13.9 65 1 0 0 0 1 1 0  
4 1.49 9.9 -1.34 -0.25 21.1 73 3 1 1 2 1 0 0  
5 1.38 11.0 -1.73 -0.45 18.2 70 2 1 1 2 1 0 0  
6 1.38 12.5 -1.88 -0.35 18.9 68 3 0 1 2 1 1 0  
7 1.56 8.0 1.76 0.34 1.4 93 1 0 0 4 0 0 0  
8 1.60 12.1 1.03 0.18 9.6 91 0 2 0 4 0 0 0  
9 2.08 5.0 -1.78 -0.54 24.9 71 2 1 0 1 0 0 0  263 MES A
10 2.07 3.4 -0.11 0.00 12.6 58 1 0 0 0 3 0 0  
11 2.04 27.0 0.17 0.00 13.3 78 1 2 0 1 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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