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PDBsum entry 3myq

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Cleft analysis for: 3myq PDB id
3myq
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2018.67 1.93 63.85 6 10.36 2 11.68 1 9 4 6 4 5 8 0 DMS 264[A] (4 atoms)
2 1044.14 0.00 73.33 1 9.04 4 8.06 6 5 3 6 11 5 2 0 DMS 265[A], E27 266[A] (28 atoms)
3 906.61 0.00 67.04 3 8.47 5 7.96 7 4 3 5 2 2 5 0  
4 861.05 0.00 59.33 7 8.17 6 8.70 4 5 3 6 5 1 2 0  
5 582.61 0.00 53.69 10 6.43 9 9.38 3 3 2 2 3 0 4 0  
6 550.12 0.00 63.91 5 6.04 10 10.70 2 5 0 1 3 5 1 0  
7 553.50 0.00 56.43 9 7.47 7 6.49 8 1 3 2 3 1 3 1  
8 369.56 0.00 64.16 4 11.65 1 8.37 5 2 2 5 1 2 0 0  
9 323.58 0.00 70.08 2 9.97 3 0.00 10 3 2 0 4 0 0 0 MES 263[A] (12 atoms)
10 373.78 0.00 58.13 8 6.83 8 5.87 9 2 1 2 0 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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