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PDBsum entry 3mv8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3mv8 calculated with MOLE 2.0 PDB id
3mv8
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.68 4.08 29.1 -1.92 -0.54 20.5 82 3 3 3 1 0 2 1  
2 1.74 1.72 48.3 -2.04 -0.61 19.5 79 4 5 5 1 1 3 1  
3 1.54 2.38 55.3 -2.00 -0.64 27.9 83 4 6 3 3 1 1 0  
4 1.79 1.87 95.7 -2.10 -0.42 24.0 78 9 7 4 2 6 4 0  
5 1.66 2.43 95.3 -2.21 -0.33 23.9 76 10 5 4 2 6 3 0  
6 1.72 2.11 151.3 -2.10 -0.45 26.5 82 10 12 6 8 4 3 0  
7 1.49 2.47 170.0 -2.16 -0.41 27.9 82 11 11 8 9 5 2 0  
8 1.71 2.12 173.2 -2.10 -0.33 24.5 80 11 11 9 8 9 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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