 |
PDBsum entry 3mv8
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3mv8 calculated with MOLE 2.0
|
PDB id
|
|
|
|
3mv8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
8 pores,
coloured by radius |
 |
8 pores,
coloured by radius
|
8 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.68 |
4.08 |
29.1 |
-1.92 |
-0.54 |
20.5 |
82 |
 |
3 |
3 |
3 |
1 |
0 |
2 |
1 |
 |
|
 |
 |
2 |
 |
1.74 |
1.72 |
48.3 |
-2.04 |
-0.61 |
19.5 |
79 |
4 |
5 |
5 |
1 |
1 |
3 |
1 |
|
 |
3 |
 |
1.54 |
2.38 |
55.3 |
-2.00 |
-0.64 |
27.9 |
83 |
4 |
6 |
3 |
3 |
1 |
1 |
0 |
|
 |
4 |
 |
1.79 |
1.87 |
95.7 |
-2.10 |
-0.42 |
24.0 |
78 |
9 |
7 |
4 |
2 |
6 |
4 |
0 |
|
 |
5 |
 |
1.66 |
2.43 |
95.3 |
-2.21 |
-0.33 |
23.9 |
76 |
10 |
5 |
4 |
2 |
6 |
3 |
0 |
|
 |
6 |
 |
1.72 |
2.11 |
151.3 |
-2.10 |
-0.45 |
26.5 |
82 |
10 |
12 |
6 |
8 |
4 |
3 |
0 |
|
 |
7 |
 |
1.49 |
2.47 |
170.0 |
-2.16 |
-0.41 |
27.9 |
82 |
11 |
11 |
8 |
9 |
5 |
2 |
0 |
|
 |
8 |
 |
1.71 |
2.12 |
173.2 |
-2.10 |
-0.33 |
24.5 |
80 |
11 |
11 |
9 |
8 |
9 |
4 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |