PDBsum entry 3mug Go to PDB code:  Pore analysis for: 3mug calculated with MOLE 2.0 PDB id 3mug Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   21 pores, coloured by radius 39 pores, coloured by radius 39 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.66 1.66 31.7 -0.99 -0.23 11.4 81 1 1 1 2 3 1 0  NAG 1 N NAG 2 N 2 3.16 3.16 42.4 -1.04 -0.82 4.2 91 1 0 6 1 0 2 0   3 1.27 1.99 43.9 -0.95 -0.57 12.1 97 3 1 6 5 0 1 0   4 2.12 2.19 45.4 -0.93 -0.63 12.5 91 2 3 3 3 0 1 0   5 1.36 1.54 55.4 -1.16 -0.51 12.7 89 4 3 8 2 3 1 0  NAG 1 N NAG 2 N 6 1.85 2.10 60.8 -0.89 -0.69 8.5 95 2 1 3 2 0 2 0   7 1.37 1.53 63.5 -0.89 -0.69 11.5 99 3 3 8 4 0 1 0   8 1.89 1.89 63.4 -0.67 -0.66 6.4 91 3 1 4 3 0 3 0   9 1.90 1.91 64.6 -0.66 -0.67 7.0 98 2 2 5 4 0 1 0   10 1.84 2.10 67.5 -0.92 -0.66 8.8 92 2 1 4 3 0 3 0   11 1.89 1.89 71.3 -0.71 -0.64 7.3 95 2 2 6 5 0 2 0   12 1.27 2.03 95.3 -0.86 -0.58 10.7 92 5 2 6 7 1 4 0   13 2.05 2.05 101.1 -1.24 -0.75 7.9 95 1 5 12 5 1 1 0   14 1.32 1.52 198.1 -1.14 -0.65 12.5 96 10 7 23 12 0 1 0   15 2.22 2.93 28.4 -1.49 -0.45 17.3 85 5 1 4 2 1 1 0  TYS 100 F i:H 16 3.36 3.52 31.4 -0.85 0.22 14.4 79 3 4 2 1 5 0 0  NAG 2 M 17 2.96 2.96 31.5 -1.65 -0.31 19.8 94 3 2 5 1 2 0 0  NAG 1 M NAG 2 M 18 1.84 2.87 35.6 -2.08 -0.39 19.1 77 4 1 5 0 3 2 0  TYS 100 F i:H NAG 2 M 19 1.84 2.88 37.2 -2.11 -0.28 19.3 77 4 3 5 0 4 1 0  TYS 100 F i:H NAG 2 M 20 1.25 1.45 41.2 -1.65 -0.77 11.3 98 2 2 5 0 0 0 0   21 1.66 1.68 41.3 -1.53 -0.26 18.6 89 3 4 5 1 5 0 0   22 2.18 2.28 41.5 -1.96 -0.58 19.5 92 3 2 5 0 2 0 0  NAG 1 M NAG 2 M 23 2.21 2.25 43.3 -0.93 -0.01 14.4 79 4 4 3 1 6 0 0  NAG 2 M 24 1.29 1.39 47.7 -1.20 -0.72 10.6 100 4 1 8 3 0 0 0   25 1.25 1.45 52.3 -1.11 -0.70 11.2 103 3 1 10 2 0 0 0   26 1.58 1.58 57.8 -1.15 -0.50 13.4 81 3 4 2 2 2 2 0  NAG 1 M NAG 2 M 27 1.87 2.91 64.3 -1.21 -0.07 15.9 81 7 3 6 3 7 2 0  TYS 100 F i:H NAG 2 M 28 1.43 1.94 80.3 -1.20 -0.67 11.9 94 4 3 9 4 1 1 0  NAG 1 M NAG 2 M 29 1.40 1.50 81.1 -1.35 -0.66 13.3 95 5 3 11 3 1 1 0  NAG 1 M NAG 2 M 30 1.19 3.07 81.7 -0.82 -0.32 8.6 82 3 5 7 1 5 2 0  NAG 1 M NAG 2 M 31 1.15 3.08 83.1 -0.73 -0.47 10.9 88 3 5 7 4 3 3 0   32 1.31 1.39 83.4 -0.99 -0.56 13.2 95 6 2 11 5 1 1 0  NAG 1 M NAG 2 M 33 1.23 1.42 86.8 -1.25 -0.65 14.6 96 5 5 12 6 1 2 0   34 1.20 1.45 89.0 -1.18 -0.65 13.8 95 5 5 10 7 1 2 0   35 1.25 3.12 89.3 -0.83 -0.52 9.3 94 3 2 11 5 2 2 0   36 1.33 3.15 90.2 -1.02 -0.54 10.6 95 4 2 13 4 2 2 0   37 1.17 2.93 92.5 -0.71 -0.45 10.6 95 5 1 13 6 2 2 0   38 1.16 1.21 32.1 -0.31 -0.44 10.4 84 2 2 2 3 0 2 0   39 1.36 2.12 31.3 -1.14 -0.66 11.1 96 3 1 5 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.