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PDBsum entry 3mss

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Pore analysis for: 3mss calculated with MOLE 2.0 PDB id
3mss
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.81 4.26 30.6 -1.07 -0.36 22.6 75 3 3 1 5 0 0 0  
2 2.81 4.25 33.0 -1.38 -0.43 23.3 76 3 4 2 5 0 1 0  
3 1.48 1.75 36.3 0.54 -0.02 6.4 77 2 2 1 8 2 0 0  STI 1 C
4 1.46 1.46 36.6 -0.75 -0.24 24.6 80 3 3 1 6 0 0 0  STI 1 A
5 1.95 2.16 55.6 -0.50 -0.24 14.4 86 2 3 5 6 0 2 0  MS7 516 B MS7 516 C
6 1.40 1.71 57.2 -0.37 -0.22 15.1 85 5 2 3 7 1 0 0  STI 1 B
7 1.94 2.04 62.2 -0.41 -0.11 16.6 83 3 3 2 9 3 0 0  STI 1 B
8 2.60 2.61 69.9 -0.83 -0.38 14.4 83 3 4 6 6 2 1 0  MS7 516 B
9 1.32 1.29 76.8 -2.57 -0.56 24.0 81 4 4 4 4 2 2 0  MS7 516 B
10 1.30 1.30 80.4 -1.37 -0.33 15.8 83 4 2 6 7 2 2 0  MS7 516 B MS7 516 C
11 2.46 2.49 89.8 -1.01 -0.43 18.3 82 5 6 6 6 3 1 0  MS7 516 B
12 1.17 1.22 91.7 -0.14 -0.11 11.1 78 5 4 6 13 4 2 0  STI 1 A MS7 516 B MS7 516 C
13 1.80 2.12 90.9 -0.67 -0.08 19.1 79 5 5 2 10 4 0 0  STI 1 C
14 1.28 1.29 93.4 -2.42 -0.60 22.2 82 5 5 5 3 2 1 0  MS7 516 B
15 1.32 1.32 112.9 -1.44 -0.32 17.7 76 7 5 5 10 6 1 0  STI 1 A MS7 516 B
16 1.34 1.27 115.0 -2.25 -0.61 23.1 80 8 7 4 3 3 2 0  MS7 516 B
17 1.43 1.68 33.9 1.12 0.21 5.1 77 1 2 1 8 2 1 0  STI 1 D
18 1.40 1.75 40.2 -0.65 -0.24 20.4 82 5 2 2 5 0 1 0  STI 1 D
19 1.97 2.20 42.6 -0.14 0.01 16.9 80 3 3 1 7 3 0 0  STI 1 D
20 1.46 1.46 49.4 -0.08 0.28 9.4 72 3 3 1 9 5 0 0  STI 1 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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