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PDBsum entry 3mly
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Pore analysis for: 3mly calculated with  MOLE 2.0
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PDB id
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3mly
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.95 |
3.00 |
31.6 |
-1.56 |
-0.62 |
13.7 |
81 |
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3 |
1 |
3 |
1 |
0 |
4 |
0 |
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2 |
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1.78 |
1.78 |
31.6 |
-0.55 |
-0.23 |
4.7 |
75 |
1 |
1 |
4 |
2 |
2 |
4 |
0 |
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3 |
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1.62 |
1.73 |
35.3 |
-0.24 |
-0.19 |
5.2 |
84 |
1 |
1 |
6 |
2 |
2 |
2 |
0 |
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4 |
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1.95 |
2.60 |
37.3 |
-0.89 |
-0.59 |
4.6 |
86 |
0 |
1 |
5 |
2 |
0 |
3 |
0 |
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5 |
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3.44 |
3.60 |
38.3 |
-2.27 |
-0.39 |
29.6 |
81 |
7 |
1 |
2 |
0 |
0 |
2 |
0 |
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6 |
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3.41 |
3.60 |
38.8 |
-2.01 |
-0.54 |
24.0 |
88 |
6 |
1 |
3 |
0 |
0 |
1 |
0 |
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7 |
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2.18 |
2.94 |
54.5 |
-1.81 |
-0.49 |
19.5 |
82 |
6 |
2 |
2 |
1 |
1 |
3 |
0 |
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8 |
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1.66 |
1.72 |
68.6 |
-1.18 |
-0.41 |
12.3 |
85 |
5 |
1 |
8 |
2 |
2 |
2 |
0 |
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9 |
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2.80 |
4.29 |
75.4 |
-1.99 |
-0.47 |
23.7 |
81 |
10 |
3 |
3 |
2 |
1 |
5 |
0 |
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10 |
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1.97 |
3.04 |
77.2 |
-1.71 |
-0.50 |
17.5 |
85 |
6 |
2 |
6 |
3 |
1 |
3 |
0 |
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11 |
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1.61 |
1.68 |
97.9 |
-0.99 |
-0.47 |
8.5 |
87 |
5 |
0 |
13 |
6 |
2 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program