PDBsum entry 3mee Go to PDB code:  Tunnel analysis for: 3mee calculated with MOLE 2.0 PDB id 3mee Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.43 23.3 -1.67 -0.43 20.9 83 3 3 2 1 1 0 0   2 1.19 1.19 28.9 -1.25 -0.40 17.3 79 3 3 1 4 2 0 0   3 1.18 1.96 25.3 -0.53 -0.01 14.8 68 3 2 2 5 0 1 0   4 1.17 1.78 25.1 0.09 0.27 5.7 80 2 0 1 5 3 1 0   5 1.19 1.85 26.3 -0.14 0.15 2.6 79 1 0 1 5 4 1 0   6 1.21 1.80 27.5 -0.64 -0.07 3.0 81 1 0 7 4 3 0 0   7 1.18 1.86 27.5 -0.31 0.24 4.8 76 2 0 1 6 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.