PDBsum entry 3mec Go to PDB code:  Tunnel analysis for: 3mec calculated with MOLE 2.0 PDB id 3mec Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.79 33.4 -0.36 -0.06 13.7 74 3 1 3 8 0 0 0   2 1.15 2.06 33.9 1.36 0.39 2.6 69 1 0 2 9 1 1 0   3 1.15 1.70 34.5 -0.21 0.03 14.3 75 3 1 3 10 0 0 0   4 1.16 2.07 34.9 1.52 0.46 2.5 70 1 0 2 11 1 1 0   5 1.15 2.14 35.3 0.29 0.08 10.9 76 3 1 2 8 0 0 0   6 1.16 1.89 51.2 0.27 0.10 10.0 75 3 2 2 10 1 0 0   7 1.16 1.40 17.0 -1.94 -0.58 28.2 92 1 4 2 2 0 0 0   8 1.10 2.36 28.1 0.11 0.20 8.9 84 1 1 2 7 1 1 0   9 1.37 2.27 15.2 1.19 0.59 15.1 86 2 1 2 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.