PDBsum entry 3mdc Go to PDB code:  Pore analysis for: 3mdc calculated with MOLE 2.0 PDB id 3mdc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.31 27.5 -1.38 -0.36 21.3 83 3 4 1 4 2 0 0  GTF 576 A MG 579 A DC 6 P 2 2.99 3.08 36.6 -2.15 -0.41 24.5 83 6 2 2 1 1 0 0  GTF 576 A DA 2 P DG 3 P DT 4 P DA 5 P DC 6 P DG 3 T DT 7 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.