PDBsum entry 3maq Go to PDB code:  Tunnel analysis for: 3maq calculated with MOLE 2.0 PDB id 3maq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.21 34.1 -2.02 -0.61 21.9 77 4 2 1 0 1 1 0  DG 910 P DC 808 T DG 809 T DC 810 T DT 811 T 2 1.37 1.36 39.1 -2.02 -0.59 16.4 71 4 1 1 0 1 2 0  DT 906 P DA 907 P DG 908 P DG 910 P DC 808 T DG 809 T DC 810 T DT 811 T DA 812 T DG 813 T DG 814 T DC 815 T DA 816 T 3 1.36 1.36 40.9 -2.26 -0.43 22.9 73 6 1 2 0 2 0 0  DG 903 P DG 910 P DC 808 T DG 809 T DC 810 T DT 811 T DA 812 T 4 1.34 1.50 17.0 -0.57 -0.02 7.1 67 1 0 2 1 4 0 0   5 1.34 1.48 17.8 -0.20 0.11 6.0 74 1 0 3 2 4 0 0   6 1.39 1.51 22.2 -1.37 -0.34 16.2 73 1 1 2 0 3 0 0   7 1.41 1.41 22.9 -0.85 -0.17 14.2 80 1 1 3 1 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.