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PDBsum entry 3m8s
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Tunnel analysis for: 3m8s calculated with  MOLE 2.0
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PDB id
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3m8s
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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3 tunnels,
coloured by
tunnel radius
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3 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.25 |
2.21 |
36.5 |
-1.40 |
-0.15 |
25.6 |
76 |
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5 |
6 |
0 |
6 |
2 |
1 |
0 |
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MG 1 A HXB 113 A DC 111 B DOC 112 B
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2 |
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1.25 |
2.07 |
46.4 |
-0.99 |
-0.14 |
21.1 |
79 |
5 |
4 |
0 |
7 |
3 |
0 |
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HXB 113 A DG 110 B DC 111 B DOC 112 B DA 204 C DG
205 C
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3 |
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1.26 |
2.01 |
52.6 |
-1.26 |
-0.15 |
23.2 |
78 |
6 |
3 |
0 |
5 |
2 |
0 |
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HXB 113 A GOL 3 B DC 109 B DG 110 B DC 111 B DOC
112 B GOL 1 C ACT 4 C DA 204 C DG 205 C DG 206 C
DC 207 C DG 208 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program