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PDBsum entry 3m5h
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Pore analysis for: 3m5h calculated with  MOLE 2.0
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PDB id
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3m5h
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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14 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.17 |
2.22 |
27.1 |
-0.18 |
-0.18 |
7.2 |
80 |
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2 |
0 |
2 |
4 |
1 |
1 |
0 |
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2 |
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1.41 |
1.41 |
42.1 |
-2.51 |
-0.77 |
22.8 |
84 |
4 |
3 |
5 |
0 |
0 |
1 |
0 |
NAG 183 D
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3 |
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2.62 |
2.98 |
46.2 |
-2.44 |
-0.68 |
21.0 |
82 |
3 |
5 |
5 |
1 |
2 |
1 |
0 |
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4 |
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2.63 |
2.98 |
49.2 |
-2.65 |
-0.69 |
21.5 |
80 |
4 |
7 |
5 |
1 |
2 |
1 |
0 |
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5 |
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1.51 |
1.66 |
62.2 |
-1.47 |
-0.27 |
29.9 |
82 |
11 |
7 |
4 |
4 |
1 |
0 |
0 |
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6 |
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1.17 |
2.20 |
65.6 |
-1.20 |
-0.13 |
21.4 |
78 |
6 |
3 |
4 |
5 |
2 |
1 |
0 |
GOL 186 B NAG 183 D
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7 |
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2.12 |
3.62 |
79.7 |
-2.51 |
-0.62 |
18.9 |
85 |
5 |
5 |
9 |
2 |
3 |
1 |
0 |
GAL 1 I SIA 2 I
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8 |
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1.96 |
2.21 |
181.0 |
-2.17 |
-0.66 |
25.7 |
81 |
18 |
17 |
14 |
1 |
4 |
1 |
0 |
NAG 1 H NAG 2 H
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9 |
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1.46 |
4.19 |
197.4 |
-2.01 |
-0.47 |
28.4 |
81 |
19 |
19 |
14 |
5 |
3 |
1 |
0 |
NAG 1 H NAG 2 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program