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PDBsum entry 3m4u

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3m4u calculated with MOLE 2.0 PDB id
3m4u
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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24 tunnels, coloured by tunnel radius 24 tunnels, coloured by tunnel radius 24 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.55 9.3 -1.79 -0.70 20.2 72 1 3 0 0 0 1 0  
2 1.91 12.8 0.76 0.06 17.3 92 1 3 0 7 0 0 0  
3 1.71 16.6 0.82 0.21 13.9 86 1 3 1 4 1 0 0  
4 1.34 19.1 -1.40 -0.37 29.9 84 2 5 0 5 0 1 0  
5 2.30 23.6 -0.03 -0.18 18.0 90 3 3 2 9 0 0 0  
6 1.31 26.4 -1.37 -0.46 24.7 84 3 5 1 5 0 1 0  
7 2.04 27.4 -0.55 -0.15 19.4 83 3 4 2 5 1 0 0  
8 2.03 27.5 -0.49 -0.16 21.2 81 2 6 2 7 1 0 0  
9 1.30 29.1 -1.40 -0.51 22.8 81 4 4 2 3 0 1 0  
10 1.29 30.0 -0.84 -0.29 19.3 80 3 4 1 4 1 1 0  
11 1.27 38.3 -1.56 -0.49 23.6 76 4 7 2 4 1 1 0  
12 1.45 12.3 0.55 0.18 9.1 84 1 1 2 2 1 0 0  
13 1.51 10.8 1.50 0.50 5.5 84 1 0 1 2 1 0 0  
14 1.54 11.7 1.45 0.54 6.1 88 1 0 2 2 1 0 0  
15 1.30 16.1 0.43 0.26 2.0 73 0 0 0 4 2 2 0  
16 1.72 2.4 -1.18 -0.53 17.5 70 1 1 0 1 0 1 0  
17 2.54 7.7 -1.08 -0.33 23.3 77 1 3 0 2 0 1 0  
18 1.87 11.1 0.33 0.15 2.0 75 0 0 1 4 2 0 0  
19 1.76 12.8 0.07 -0.09 3.2 81 0 1 1 3 1 0 0  
20 1.96 16.6 0.17 0.20 4.2 78 0 1 1 4 2 0 0  
21 2.36 4.5 1.62 0.68 10.6 93 1 0 1 3 0 0 0  
22 1.82 6.0 -0.55 -0.62 7.4 100 1 0 0 1 0 0 0  
23 1.45 12.3 2.69 0.75 0.6 85 0 0 1 5 1 1 0  
24 1.45 12.8 2.58 0.66 0.6 86 0 0 1 6 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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