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PDBsum entry 3m1j

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Cleft analysis for: 3m1j PDB id
3m1j
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1881.56 1.93 58.77 9 9.49 2 13.28 1 6 5 3 2 4 8 0  
2 975.38 0.00 68.68 3 8.57 4 8.25 4 5 3 5 8 3 3 0 DMS 302[A], IMD 303[A] (5 atoms)
3 884.25 0.00 57.97 10 6.29 9 7.64 6 3 2 3 5 1 5 0  
4 815.91 0.00 66.34 4 7.61 5 6.66 9 5 3 5 2 2 4 0  
5 772.03 0.00 59.28 8 6.13 10 8.37 3 6 1 2 3 5 1 0  
6 641.67 0.00 65.49 6 6.50 7 7.78 5 2 3 4 6 1 2 0  
7 449.30 0.00 76.06 1 9.86 1 9.03 2 5 1 2 2 1 4 0  
8 384.75 0.00 66.15 5 6.46 8 6.61 10 1 2 2 3 2 2 0  
9 346.36 0.00 59.50 7 7.09 6 7.62 7 1 2 5 1 2 0 0  
10 243.42 0.00 75.36 2 9.49 3 7.29 8 4 1 1 0 3 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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