 |
PDBsum entry 3lwl
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3lwl calculated with MOLE 2.0
|
PDB id
|
|
|
|
3lwl
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 pores,
coloured by radius |
 |
2 pores,
coloured by radius
|
2 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.88 |
1.94 |
27.6 |
-2.02 |
-0.70 |
20.0 |
91 |
 |
4 |
2 |
2 |
0 |
0 |
0 |
0 |
 |
ACT 5 A GOL 8 B DA 105 B DC 106 B DG 107 B DG 108 B ACT 6 C DG 211 C DT 212 C DG 213 C DG 214 C
|
 |
 |
2 |
 |
1.18 |
1.30 |
59.4 |
-1.21 |
-0.56 |
17.8 |
89 |
7 |
5 |
3 |
6 |
0 |
0 |
0 |
DDS 1 A ACT 5 A GOL 4 B GOL 8 B DG 108 B DC 109 B DG 110 B ACT 1 C DA 203 C DT 205 C DG 206 C DG 211 C DT 212 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |