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PDBsum entry 3lfd
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Tunnel analysis for: 3lfd calculated with  MOLE 2.0
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PDB id
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3lfd
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
2.03 |
18.9 |
1.47 |
0.48 |
9.2 |
74 |
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1 |
0 |
0 |
7 |
1 |
0 |
0 |
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Z85 361 A
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2 |
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1.18 |
1.95 |
30.7 |
0.85 |
0.30 |
14.4 |
75 |
4 |
2 |
1 |
8 |
0 |
0 |
0 |
Z85 361 A
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3 |
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1.32 |
1.32 |
17.0 |
2.45 |
0.96 |
0.6 |
72 |
0 |
0 |
0 |
8 |
1 |
1 |
0 |
BOG 1000 A
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4 |
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1.31 |
1.31 |
19.8 |
2.37 |
0.99 |
0.6 |
69 |
0 |
0 |
0 |
7 |
1 |
1 |
0 |
BOG 1000 A
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5 |
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1.32 |
1.32 |
20.1 |
1.90 |
0.88 |
3.6 |
68 |
1 |
0 |
0 |
8 |
1 |
1 |
0 |
BOG 1000 A
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6 |
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1.32 |
1.33 |
21.3 |
0.67 |
0.42 |
9.6 |
71 |
2 |
3 |
1 |
7 |
1 |
1 |
0 |
BOG 1000 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program