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PDBsum entry 3ldz

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 3ldz calculated with MOLE 2.0 PDB id
3ldz
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 3.07 29.3 -0.56 -0.21 13.1 81 4 3 1 1 2 0 0  
2 2.08 2.08 32.8 -2.04 -0.48 30.4 82 5 4 1 1 1 0 0  
3 1.63 1.71 47.7 -2.58 -0.36 32.5 78 13 4 0 2 0 4 0  
4 1.31 3.04 48.2 -0.96 -0.24 16.8 84 4 4 2 1 3 0 0  
5 2.08 2.08 48.6 -1.90 -0.47 28.6 82 7 5 1 3 1 0 0  
6 1.31 3.05 50.7 -0.66 -0.26 15.3 81 4 5 1 4 2 0 0  
7 1.62 1.66 64.7 -2.39 -0.36 31.3 78 16 6 0 4 0 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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