PDBsum entry 3ldp Go to PDB code:  Pore analysis for: 3ldp calculated with MOLE 2.0 PDB id 3ldp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.54 3.67 25.6 -2.74 -0.80 35.6 77 5 5 0 0 0 0 0   2 2.04 2.21 29.1 -2.24 -0.33 27.8 76 4 4 2 1 4 0 0  3P1 408 A 3 1.55 1.53 46.5 -1.47 -0.46 19.3 77 6 4 3 1 4 0 0   4 2.03 2.13 51.5 -3.02 -0.52 29.5 82 8 5 6 1 3 1 0  3P1 502 B 5 1.52 1.52 64.9 -1.77 -0.35 19.2 85 7 1 6 2 3 0 0  3P1 502 B 6 1.87 2.27 91.8 -2.60 -0.54 26.5 78 6 8 4 3 3 0 0  3P1 408 A 7 2.07 2.50 99.7 -2.26 -0.48 26.0 83 7 6 7 4 4 0 0  3P1 408 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.