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PDBsum entry 3l73

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Pore analysis for: 3l73 calculated with MOLE 2.0 PDB id
3l73
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 1.43 31.2 -0.99 -0.41 8.5 82 3 2 2 3 2 0 0  
2 1.91 1.91 36.7 0.09 -0.29 2.6 76 1 0 2 6 2 2 1  HEC 501 D
3 2.24 3.91 53.7 -1.74 -0.18 24.0 76 8 6 2 3 4 2 0  
4 1.91 1.91 54.3 -0.34 0.02 12.2 75 6 2 1 7 3 4 2  HEC 501 D
5 1.91 1.90 63.6 -1.43 -0.14 20.8 79 8 4 3 4 2 3 2  HEC 501 D
6 2.37 2.37 70.7 -1.81 -0.56 15.0 86 6 4 5 5 1 3 0  UNK 40 I UNK 42 I
7 1.32 1.34 73.3 -1.39 -0.33 17.7 79 7 6 4 4 2 3 0  UNK 40 I UNK 42 I
8 1.53 2.36 85.1 -1.72 -0.45 23.4 83 13 8 5 4 1 0 0  
9 2.22 2.22 87.8 -2.28 -0.50 25.2 79 12 5 4 4 2 2 0  UNK 39 I UNK 42 I
10 1.50 2.44 101.2 -2.10 -0.49 27.4 80 18 8 5 4 1 3 0  UNK 39 I UNK 42 I UNK 39 V UNK 40 V
11 2.51 2.60 102.5 -1.59 -0.56 18.5 83 9 7 6 6 2 2 0  UNK 38 V UNK 39 V UNK 40 V
12 1.49 2.28 104.7 -2.28 -0.67 24.7 82 13 10 6 3 3 3 0  UNK 38 V UNK 39 V UNK 40 V
13 1.29 1.30 103.8 -1.16 -0.32 18.8 78 10 8 5 5 3 2 0  UNK 38 V UNK 39 V UNK 40 V
14 1.28 1.41 110.0 -1.78 -0.44 24.2 78 14 11 5 3 4 3 0  UNK 38 V UNK 39 V UNK 40 V
15 2.07 2.39 124.6 -0.91 0.21 17.4 70 15 3 4 14 11 4 0  PEE 2007 C CDL 2003 D CDL 2004 G
16 1.27 1.28 134.9 -1.52 -0.37 14.4 81 11 5 9 3 4 5 0  UNK 30 I UNK 31 I UNK 32 I UNK 34 I UNK 42 I
17 2.02 2.93 163.9 -1.14 -0.09 14.0 74 13 8 10 12 13 7 0  PEE 3007 P HEC 501 Q CDL 3004 T
18 2.31 2.36 165.3 -0.80 0.00 11.4 74 12 5 11 15 10 10 0  HEC 501 D PEE 3007 P HEC 501 Q CDL 3004 T
19 2.08 2.59 187.3 -2.08 -0.38 21.5 77 16 8 8 9 8 6 0  PEE 3007 P CDL 3003 Q CDL 3004 T UNK 38 V UNK 39 V
20 1.27 1.27 192.6 -1.75 -0.24 21.8 74 17 9 7 9 9 6 0  PEE 3007 P CDL 3003 Q CDL 3004 T UNK 38 V UNK 39 V
21 1.61 2.27 196.6 -2.25 -0.36 26.0 76 24 10 7 9 7 8 0  PEE 3007 P CDL 3003 Q CDL 3004 T UNK 39 V UNK 40 V
22 2.12 2.20 197.3 -1.79 -0.26 22.0 74 21 7 6 12 6 8 0  PEE 3007 P CDL 3003 Q CDL 3004 T UNK 39 V UNK 40 V
23 2.26 3.32 220.4 -0.33 -0.02 14.0 83 15 11 14 33 5 5 0  PEE 2008 A UQ 2002 C HEC 501 D BOG 2009 D BOG
2091 D PEE 2005 E BOG 2010 P
24 1.21 1.38 358.2 -0.76 -0.17 17.9 83 28 21 19 41 9 2 0  PEE 2008 A UQ 2002 C BOG 2009 D BOG 2091 D PEE
2005 E BOG 2010 P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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