 |
PDBsum entry 3l73
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3l73 calculated with MOLE 2.0
|
PDB id
|
|
|
|
3l73
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
21 pores,
coloured by radius |
 |
24 pores,
coloured by radius
|
24 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.31 |
1.43 |
31.2 |
-0.99 |
-0.41 |
8.5 |
82 |
 |
3 |
2 |
2 |
3 |
2 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.91 |
1.91 |
36.7 |
0.09 |
-0.29 |
2.6 |
76 |
1 |
0 |
2 |
6 |
2 |
2 |
1 |
HEC 501 D
|
 |
3 |
 |
2.24 |
3.91 |
53.7 |
-1.74 |
-0.18 |
24.0 |
76 |
8 |
6 |
2 |
3 |
4 |
2 |
0 |
|
 |
4 |
 |
1.91 |
1.91 |
54.3 |
-0.34 |
0.02 |
12.2 |
75 |
6 |
2 |
1 |
7 |
3 |
4 |
2 |
HEC 501 D
|
 |
5 |
 |
1.91 |
1.90 |
63.6 |
-1.43 |
-0.14 |
20.8 |
79 |
8 |
4 |
3 |
4 |
2 |
3 |
2 |
HEC 501 D
|
 |
6 |
 |
2.37 |
2.37 |
70.7 |
-1.81 |
-0.56 |
15.0 |
86 |
6 |
4 |
5 |
5 |
1 |
3 |
0 |
UNK 40 I UNK 42 I
|
 |
7 |
 |
1.32 |
1.34 |
73.3 |
-1.39 |
-0.33 |
17.7 |
79 |
7 |
6 |
4 |
4 |
2 |
3 |
0 |
UNK 40 I UNK 42 I
|
 |
8 |
 |
1.53 |
2.36 |
85.1 |
-1.72 |
-0.45 |
23.4 |
83 |
13 |
8 |
5 |
4 |
1 |
0 |
0 |
|
 |
9 |
 |
2.22 |
2.22 |
87.8 |
-2.28 |
-0.50 |
25.2 |
79 |
12 |
5 |
4 |
4 |
2 |
2 |
0 |
UNK 39 I UNK 42 I
|
 |
10 |
 |
1.50 |
2.44 |
101.2 |
-2.10 |
-0.49 |
27.4 |
80 |
18 |
8 |
5 |
4 |
1 |
3 |
0 |
UNK 39 I UNK 42 I UNK 39 V UNK 40 V
|
 |
11 |
 |
2.51 |
2.60 |
102.5 |
-1.59 |
-0.56 |
18.5 |
83 |
9 |
7 |
6 |
6 |
2 |
2 |
0 |
UNK 38 V UNK 39 V UNK 40 V
|
 |
12 |
 |
1.49 |
2.28 |
104.7 |
-2.28 |
-0.67 |
24.7 |
82 |
13 |
10 |
6 |
3 |
3 |
3 |
0 |
UNK 38 V UNK 39 V UNK 40 V
|
 |
13 |
 |
1.29 |
1.30 |
103.8 |
-1.16 |
-0.32 |
18.8 |
78 |
10 |
8 |
5 |
5 |
3 |
2 |
0 |
UNK 38 V UNK 39 V UNK 40 V
|
 |
14 |
 |
1.28 |
1.41 |
110.0 |
-1.78 |
-0.44 |
24.2 |
78 |
14 |
11 |
5 |
3 |
4 |
3 |
0 |
UNK 38 V UNK 39 V UNK 40 V
|
 |
15 |
 |
2.07 |
2.39 |
124.6 |
-0.91 |
0.21 |
17.4 |
70 |
15 |
3 |
4 |
14 |
11 |
4 |
0 |
PEE 2007 C CDL 2003 D CDL 2004 G
|
 |
16 |
 |
1.27 |
1.28 |
134.9 |
-1.52 |
-0.37 |
14.4 |
81 |
11 |
5 |
9 |
3 |
4 |
5 |
0 |
UNK 30 I UNK 31 I UNK 32 I UNK 34 I UNK 42 I
|
 |
17 |
 |
2.02 |
2.93 |
163.9 |
-1.14 |
-0.09 |
14.0 |
74 |
13 |
8 |
10 |
12 |
13 |
7 |
0 |
PEE 3007 P HEC 501 Q CDL 3004 T
|
 |
18 |
 |
2.31 |
2.36 |
165.3 |
-0.80 |
0.00 |
11.4 |
74 |
12 |
5 |
11 |
15 |
10 |
10 |
0 |
HEC 501 D PEE 3007 P HEC 501 Q CDL 3004 T
|
 |
19 |
 |
2.08 |
2.59 |
187.3 |
-2.08 |
-0.38 |
21.5 |
77 |
16 |
8 |
8 |
9 |
8 |
6 |
0 |
PEE 3007 P CDL 3003 Q CDL 3004 T UNK 38 V UNK 39 V
|
 |
20 |
 |
1.27 |
1.27 |
192.6 |
-1.75 |
-0.24 |
21.8 |
74 |
17 |
9 |
7 |
9 |
9 |
6 |
0 |
PEE 3007 P CDL 3003 Q CDL 3004 T UNK 38 V UNK 39 V
|
 |
21 |
 |
1.61 |
2.27 |
196.6 |
-2.25 |
-0.36 |
26.0 |
76 |
24 |
10 |
7 |
9 |
7 |
8 |
0 |
PEE 3007 P CDL 3003 Q CDL 3004 T UNK 39 V UNK 40 V
|
 |
22 |
 |
2.12 |
2.20 |
197.3 |
-1.79 |
-0.26 |
22.0 |
74 |
21 |
7 |
6 |
12 |
6 |
8 |
0 |
PEE 3007 P CDL 3003 Q CDL 3004 T UNK 39 V UNK 40 V
|
 |
23 |
 |
2.26 |
3.32 |
220.4 |
-0.33 |
-0.02 |
14.0 |
83 |
15 |
11 |
14 |
33 |
5 |
5 |
0 |
PEE 2008 A UQ 2002 C HEC 501 D BOG 2009 D BOG 2091 D PEE 2005 E BOG 2010 P
|
 |
24 |
 |
1.21 |
1.38 |
358.2 |
-0.76 |
-0.17 |
17.9 |
83 |
28 |
21 |
19 |
41 |
9 |
2 |
0 |
PEE 2008 A UQ 2002 C BOG 2009 D BOG 2091 D PEE 2005 E BOG 2010 P
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |