PDBsum entry 3l72 Go to PDB code:  Pore analysis for: 3l72 calculated with MOLE 2.0 PDB id 3l72 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   29 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.81 2.83 38.6 -2.08 -0.30 22.3 76 5 1 3 2 1 2 0   2 2.81 2.81 45.4 -2.36 -0.38 26.8 80 5 2 2 0 1 2 0   3 1.79 1.89 45.7 -2.28 -0.65 25.4 76 4 5 2 0 2 2 0   4 1.90 2.27 56.7 -2.17 0.02 26.5 71 8 1 2 5 6 2 0  CDL 2004 C PEE 2007 C CDL 2003 D 5 1.98 2.96 91.0 -0.63 -0.19 7.8 78 6 4 9 9 2 10 1  HEC 501 D HEC 501 Q 6 2.96 4.46 95.7 -1.05 -0.20 12.4 77 8 6 9 6 2 11 0  HEC 501 D HEC 501 Q 7 2.65 2.67 98.0 -1.74 -0.58 20.9 83 8 7 6 5 1 2 0  UNK 38 V UNK 39 V UNK 40 V 8 2.66 2.72 98.4 -1.80 -0.58 22.3 82 8 7 6 5 2 2 0  UNK 38 V UNK 39 V UNK 40 V 9 1.85 1.93 102.1 -1.71 -0.55 19.9 77 8 6 5 4 4 5 0  UNK 38 V UNK 39 V UNK 40 V 10 2.30 2.90 114.4 -0.75 -0.15 19.4 80 8 10 4 11 2 5 0  HEC 501 D 11 1.39 1.39 117.9 0.20 0.22 13.5 79 7 5 4 23 6 2 0  IKR 3001 P 12 2.02 2.92 119.9 -0.92 -0.21 11.3 79 9 5 10 9 3 10 1  HEC 501 D HEC 501 Q 13 2.34 2.81 123.0 -0.38 -0.18 14.8 79 7 8 5 13 3 3 1  HEC 501 D 14 1.39 1.42 121.8 0.47 0.28 12.0 80 6 6 5 23 7 1 0  IKR 2001 C BOG 2010 P 15 2.00 2.96 122.9 -0.84 -0.25 14.6 82 9 8 9 12 2 6 1  HEC 501 Q 16 1.19 1.39 130.5 -1.67 -0.37 16.2 78 10 5 10 5 4 4 0  UNK 30 V UNK 32 V UNK 35 V UNK 38 V UNK 39 V UNK 40 V 17 1.40 1.46 134.6 -1.23 -0.36 19.5 78 12 9 6 9 2 2 0  UNK 38 V UNK 39 V UNK 40 V 18 1.50 1.67 142.7 -1.28 -0.36 19.5 77 12 10 6 9 3 2 0  UNK 38 V UNK 39 V UNK 40 V 19 2.42 2.62 143.3 -1.06 -0.19 21.8 80 11 11 5 11 3 5 0  HEC 501 D 20 1.34 1.50 146.5 0.72 0.39 7.8 75 5 3 4 29 12 2 0  UQ 2002 C CDL 2004 C PEE 2007 C PEE 2008 C CDL 2003 D IKR 3001 P 21 1.28 1.47 162.5 -1.81 -0.42 15.3 77 9 6 9 7 7 8 0  UNK 30 I UNK 31 I UNK 32 I UNK 34 I UNK 35 I UNK 42 I 22 1.31 1.47 162.9 1.07 0.53 9.1 75 7 4 2 32 11 3 0  IKR 2001 C UQ 2002 C CDL 2004 C PEE 2007 C PEE 2008 C CDL 2003 D 23 1.30 1.49 168.5 -1.72 -0.42 14.4 80 9 6 12 8 7 6 0  UNK 30 I UNK 31 I UNK 32 I UNK 34 I UNK 40 I UNK 41 I UNK 42 I 24 2.37 3.92 168.6 -0.55 -0.06 18.4 85 9 10 8 24 2 0 0  UQ 2002 C PEE 2008 C BOG 2009 D BOG 2091 D PEE 2005 E 25 1.33 1.32 171.6 -0.11 0.05 13.0 81 9 7 6 25 7 4 0  IKR 2001 C BOG 2010 P UNK 38 V UNK 39 V UNK 40 V 26 1.31 1.47 175.1 -0.38 0.03 16.5 78 10 9 6 25 7 2 0  UQ 2002 C CDL 2004 C PEE 2007 C CDL 2003 D BOG 2009 D BOG 2091 D PEE 2005 E 27 1.26 1.21 179.2 -0.79 -0.12 15.9 82 11 6 10 20 8 3 0  UQ 2002 C CDL 2004 C PEE 2007 C PEE 2008 C CDL 2003 D UNK 38 V UNK 39 V UNK 40 V 28 1.32 1.30 195.0 0.71 0.45 9.0 76 7 4 6 32 15 1 0  IKR 2001 C UQ 2002 C CDL 2004 C PEE 2007 C PEE 2008 C CDL 2003 D 29 1.18 3.08 195.7 -0.31 0.02 13.5 80 11 8 11 26 9 2 0  UQ 2002 C CDL 2004 C PEE 2007 C CDL 2003 D BOG 2009 D BOG 2091 D PEE 2005 E 30 2.51 3.55 203.9 -0.91 -0.12 19.0 83 16 10 10 22 7 2 0  BOG 2010 P UQ 3002 P BOG 3009 Q BOG 3091 Q PEE 3005 R 31 1.23 2.29 49.1 1.45 0.51 7.9 77 2 1 2 9 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.